STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_10376AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (286 aa)    
Predicted Functional Partners:
KYC_10381
COG0506 Proline dehydrogenase.
       0.723
KYC_07191
Glutamate synthase [NADPH] large chain precursor; COG0067 Glutamate synthase domain 1.
    
  0.643
KYC_21491
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.641
KYC_24187
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.599
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
   0.529
KYC_10386
Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
       0.506
KYC_19059
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.505
KYC_01170
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.489
KYC_21236
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.488
ribB-2
Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.469
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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