STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_10426Dienelactone hydrolase; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. (638 aa)    
Predicted Functional Partners:
KYC_16022
Alkyl hydroperoxide reductase; COG0450 Peroxiredoxin.
   
    0.691
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.635
KYC_10421
Hypothetical protein.
       0.491
KYC_20714
Trehalose synthase; COG0366 Glycosidases.
   
    0.443
KYC_04202
Voltage gated chloride channel family protein 1; COG0038 Chloride channel protein EriC.
 
  
  0.419
KYC_03109
Porin; COG3203 Outer membrane protein (porin).
 
    0.410
nadD
Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
   
 
  0.406
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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