STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_10968Antibiotic biosynthesis monooxygenase family protein 1; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides. (114 aa)    
Predicted Functional Partners:
KYC_10963
COG2124 Cytochrome P450.
 
   
 0.852
KYC_20814
COG0640 Predicted transcriptional regulators.
 
     0.758
KYC_10958
NAD dependent epimerase/dehydratase family protein 4; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
    0.584
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
  0.514
KYC_10256
Nitrite reductase (NO-forming); COG2132 Putative multicopper oxidases; Belongs to the multicopper oxidase family.
  
  
  0.511
KYC_06706
Bacterioferritin; Iron-storage protein.
     
 0.445
KYC_23208
Rubrerythrin family protein; COG2193 Bacterioferritin (cytochrome b1).
     
 0.445
KYC_10953
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
       0.435
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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