Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
KYC_00120 | KYC_00885 | COG3333 Uncharacterized protein conserved in bacteria. | Membrane protein. | 0.499 |
KYC_00120 | KYC_00890 | COG3333 Uncharacterized protein conserved in bacteria. | COG3333 Uncharacterized protein conserved in bacteria. | 0.928 |
KYC_00120 | KYC_00925 | COG3333 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.497 |
KYC_00120 | KYC_09220 | COG3333 Uncharacterized protein conserved in bacteria. | COG3333 Uncharacterized protein conserved in bacteria. | 0.700 |
KYC_00120 | KYC_11233 | COG3333 Uncharacterized protein conserved in bacteria. | Extra-cytoplasmic solute receptor family protein 30; COG3181 Uncharacterized protein conserved in bacteria. | 0.491 |
KYC_00120 | KYC_14432 | COG3333 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.499 |
KYC_00885 | KYC_00120 | Membrane protein. | COG3333 Uncharacterized protein conserved in bacteria. | 0.499 |
KYC_00885 | KYC_00890 | Membrane protein. | COG3333 Uncharacterized protein conserved in bacteria. | 0.866 |
KYC_00885 | KYC_00920 | Membrane protein. | COG3333 Uncharacterized protein conserved in bacteria. | 0.497 |
KYC_00885 | KYC_09220 | Membrane protein. | COG3333 Uncharacterized protein conserved in bacteria. | 0.499 |
KYC_00885 | KYC_11233 | Membrane protein. | Extra-cytoplasmic solute receptor family protein 30; COG3181 Uncharacterized protein conserved in bacteria. | 0.505 |
KYC_00885 | KYC_14427 | Membrane protein. | COG3333 Uncharacterized protein conserved in bacteria. | 0.499 |
KYC_00885 | KYC_22086 | Membrane protein. | COG3333 Uncharacterized protein conserved in bacteria. | 0.499 |
KYC_00890 | KYC_00120 | COG3333 Uncharacterized protein conserved in bacteria. | COG3333 Uncharacterized protein conserved in bacteria. | 0.928 |
KYC_00890 | KYC_00885 | COG3333 Uncharacterized protein conserved in bacteria. | Membrane protein. | 0.866 |
KYC_00890 | KYC_00925 | COG3333 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.497 |
KYC_00890 | KYC_09220 | COG3333 Uncharacterized protein conserved in bacteria. | COG3333 Uncharacterized protein conserved in bacteria. | 0.676 |
KYC_00890 | KYC_11233 | COG3333 Uncharacterized protein conserved in bacteria. | Extra-cytoplasmic solute receptor family protein 30; COG3181 Uncharacterized protein conserved in bacteria. | 0.759 |
KYC_00890 | KYC_14432 | COG3333 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.499 |
KYC_00920 | KYC_00885 | COG3333 Uncharacterized protein conserved in bacteria. | Membrane protein. | 0.497 |
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