STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_12888Efflux transporter RND family, MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (384 aa)    
Predicted Functional Partners:
macB
Macrolide export ATP-binding/permease MacB; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
 
 0.986
KYC_12893
Transporter hydrophobe/amphiphile efflux-1 (HAE1) family protein; COG0841 Cation/multidrug efflux pump.
  0.980
KYC_12898
RND efflux system, outer membrane lipoprotein, NodT family; COG1538 Outer membrane protein.
 
  0.977
KYC_01774
Multidrug resistance protein; COG0841 Cation/multidrug efflux pump.
  0.926
KYC_21206
Hydrophobe/amphiphile efflux-1 HAE1; COG0841 Cation/multidrug efflux pump.
  0.926
KYC_26642
Acriflavine resistance protein B; COG0841 Cation/multidrug efflux pump.
  0.926
KYC_22781
COG1538 Outer membrane protein.
  
  0.910
KYC_21211
COG1538 Outer membrane protein.
 
  0.903
KYC_26637
COG1538 Outer membrane protein.
 
  0.903
KYC_01769
COG1538 Outer membrane protein.
 
  0.902
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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