STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_13402Hypothetical protein. (109 aa)    
Predicted Functional Partners:
KYC_13397
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
    
  0.593
KYC_13407
COG0625 Glutathione S-transferase.
       0.508
KYC_13012
Extracellular solute-binding protein, family 7 family protein 5; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
     0.488
KYC_11658
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
    
  0.472
KYC_10316
Hydrolase or acyltransferase-like protein; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
    
 0.446
KYC_13412
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 21; COG0346 Lactoylglutathione lyase and related lyases.
    
  0.438
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
  0.414
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.