STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_14070TRAP transporter solute receptor, TAXI family protein 2; COG2358 TRAP-type uncharacterized transport system, periplasmic component. (498 aa)    
Predicted Functional Partners:
KYC_00490
TRAP transporter 4TM/12TM fusion family protein 1; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
    0.834
KYC_18715
TRAP transporter 4TM/12TM fusion family protein 2; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
    0.834
gltS
Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.
    0.829
KYC_14075
Hypothetical protein.
       0.639
KYC_14080
COG1671 Uncharacterized protein conserved in bacteria; Belongs to the UPF0178 family.
       0.639
KYC_14060
GNAT family acetyltransferase.
 
     0.529
KYC_26432
COG0642 Signal transduction histidine kinase.
    
  0.508
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.