STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_14702Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase. (234 aa)    
Predicted Functional Partners:
KYC_25588
COG0684 Demethylmenaquinone methyltransferase.
  
  
  0.810
KYC_25183
COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
   
  0.671
KYC_12423
COG2120 Uncharacterized proteins, LmbE homologs.
 
  
  0.627
KYC_25793
COG2120 Uncharacterized proteins, LmbE homologs.
 
  
  0.623
KYC_08850
COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family.
 
  
  0.589
KYC_14697
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.540
KYC_01989
NAD binding domain of 6-phosphogluconate dehydrogenase family protein 5; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
 
  
  0.523
KYC_21256
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
  
  
 
0.428
KYC_01999
Hypothetical protein; COG0684 Demethylmenaquinone methyltransferase.
  
  
 
0.427
KYC_04177
Methyltransferase; COG0684 Demethylmenaquinone methyltransferase.
  
  
 
0.421
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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