STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_15117Metallo-beta-lactamase; COG0491 Zn-dependent hydrolases, including glyoxylases. (265 aa)    
Predicted Functional Partners:
KYC_15112
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.907
KYC_15107
COG1802 Transcriptional regulators.
       0.773
KYC_00330
BFD-like protein (2Fe-2S)-binding protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
 
 0.709
KYC_08760
Hypothetical protein.
  
     0.677
KYC_11388
Hypothetical protein.
  
     0.656
KYC_08755
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.594
KYC_05284
LuxR family transcriptional regulator; COG2771 DNA-binding HTH domain-containing proteins.
    
   0.565
KYC_11383
COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
     0.563
KYC_04242
Rhodanese-like domain-containing protein 2; COG0607 Rhodanese-related sulfurtransferase.
 
 0.560
KYC_15082
Receptor family ligand binding region family protein 28; COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
     0.517
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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