STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_15502Diguanylate cyclase YeaP; COG2199 FOG: GGDEF domain. (352 aa)    
Predicted Functional Partners:
KYC_20679
COG2200 FOG: EAL domain.
 0.926
KYC_18070
Diguanylate cyclase; COG2199 FOG: GGDEF domain.
 
 0.906
KYC_14487
Response regulator receiver modulated; COG0784 FOG: CheY-like receiver.
 0.896
KYC_26432
COG0642 Signal transduction histidine kinase.
  
 0.862
KYC_19099
c-di-GMP phosphodiesterase A; COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.
 
0.843
KYC_20574
Sensory box protein 6; COG2203 FOG: GAF domain.
  
 0.826
KYC_24112
EAL domain-containing protein 5; COG1455 Phosphotransferase system cellobiose-specific component IIC.
 
 
 0.813
KYC_20544
EAL domain-containing protein 3; COG0784 FOG: CheY-like receiver.
 
 
  0.779
KYC_15452
HD domain-containing protein 1; COG2206 HD-GYP domain.
 
 0.769
KYC_17568
Putative signaling membrane protein; COG4943 Predicted signal transduction protein containing sensor and EAL domains.
 
     0.766
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.