Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KYC_08135 | KYC_17292 | KYC_08135 | KYC_17292 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Hypothetical protein; COG1396 Predicted transcriptional regulators. | 0.400 |
KYC_08135 | nadE | KYC_08135 | KYC_03642 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.547 |
KYC_17282 | KYC_17287 | KYC_17282 | KYC_17287 | Hypothetical protein. | Hypothetical protein; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Belongs to the peptidase S24 family. | 0.623 |
KYC_17282 | KYC_17292 | KYC_17282 | KYC_17292 | Hypothetical protein. | Hypothetical protein; COG1396 Predicted transcriptional regulators. | 0.469 |
KYC_17287 | KYC_17282 | KYC_17287 | KYC_17282 | Hypothetical protein; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Belongs to the peptidase S24 family. | Hypothetical protein. | 0.623 |
KYC_17287 | KYC_17292 | KYC_17287 | KYC_17292 | Hypothetical protein; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Belongs to the peptidase S24 family. | Hypothetical protein; COG1396 Predicted transcriptional regulators. | 0.581 |
KYC_17292 | KYC_08135 | KYC_17292 | KYC_08135 | Hypothetical protein; COG1396 Predicted transcriptional regulators. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.400 |
KYC_17292 | KYC_17282 | KYC_17292 | KYC_17282 | Hypothetical protein; COG1396 Predicted transcriptional regulators. | Hypothetical protein. | 0.469 |
KYC_17292 | KYC_17287 | KYC_17292 | KYC_17287 | Hypothetical protein; COG1396 Predicted transcriptional regulators. | Hypothetical protein; COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases); Belongs to the peptidase S24 family. | 0.581 |
KYC_17292 | argA | KYC_17292 | KYC_17117 | Hypothetical protein; COG1396 Predicted transcriptional regulators. | N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.465 |
KYC_17292 | nadE | KYC_17292 | KYC_03642 | Hypothetical protein; COG1396 Predicted transcriptional regulators. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.468 |
argA | KYC_17292 | KYC_17117 | KYC_17292 | N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | Hypothetical protein; COG1396 Predicted transcriptional regulators. | 0.465 |
argA | nadE | KYC_17117 | KYC_03642 | N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.522 |
nadE | KYC_08135 | KYC_03642 | KYC_08135 | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.547 |
nadE | KYC_17292 | KYC_03642 | KYC_17292 | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | Hypothetical protein; COG1396 Predicted transcriptional regulators. | 0.468 |
nadE | argA | KYC_03642 | KYC_17117 | NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.522 |