STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_19729Large tegument domain-containing protein. (281 aa)    
Predicted Functional Partners:
KYC_06290
Type VI secretion-associated protein, family; COG3913 Uncharacterized protein conserved in bacteria.
  
     0.725
KYC_27613
COG3521 Uncharacterized protein conserved in bacteria.
  
     0.698
KYC_21291
Peptidase inhibitor I78 family protein.
  
     0.680
KYC_06275
D-alanyl-D-alanine carboxypeptidase.
  
     0.651
pgaA
Outer membrane protein PgaA.
  
     0.639
KYC_19724
COG1981 Predicted membrane protein.
 
     0.600
KYC_27603
Type VI secretion system protein ImpK; COG3455 Uncharacterized protein conserved in bacteria.
  
     0.566
KYC_06265
Rhs element Vgr family protein 3; COG3501 Uncharacterized protein conserved in bacteria.
  
     0.559
KYC_27633
Type VI secretion system effector, Hcp1 family protein; COG3157 Hemolysin-coregulated protein (uncharacterized).
  
     0.558
KYC_27943
Hypothetical protein.
  
     0.551
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.