Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KYC_19764Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component. (555 aa)    
Predicted Functional Partners:
KYC_19754
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.926
KYC_19759
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.924
KYC_19749
COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.822
KYC_19744
PepT family ABC transporter ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
  0.746
KYC_04662
Extracellular solute-binding protein, family 5 middle family protein 7; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
  0.745
KYC_09370
Extracellular solute-binding protein, family 5 middle family protein 6; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.570
KYC_25678
Putative extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.559
KYC_22616
Extracellular solute-binding protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
  
  
 
0.556
KYC_00175
Binding-protein-dependent transporter inner membrane component family protein 68; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.546
KYC_04652
Binding-protein-dependent transporter inner membrane component family protein 18; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
  0.544
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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