Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KYC_19799COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain. (324 aa)    
Predicted Functional Partners:
KYC_19809
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein 19; COG2764 Uncharacterized protein conserved in bacteria.
 
    0.609
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
    
 
 0.600
KYC_19804
Hypothetical protein.
       0.512
KYC_03992
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.484
KYC_09691
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.447
KYC_03987
RC149; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.404
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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