STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_21351COG1846 Transcriptional regulators. (148 aa)    
Predicted Functional Partners:
KYC_21346
Fusaric acid resistance protein family protein 1; COG1289 Predicted membrane protein.
 
   
 0.918
KYC_21336
COG1566 Multidrug resistance efflux pump; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   
 0.901
KYC_21341
Hypothetical protein.
 
     0.872
KYC_21331
Efflux transporter outer membrane factor lipoprotein 6; COG1538 Outer membrane protein.
       0.558
KYC_21356
NnrS family protein; COG3213 Uncharacterized protein involved in response to NO.
       0.417
hscB
Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.
      
 0.412
ompR
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
      
 0.410
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.