STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_21421STM-proteaseA; COG0826 Collagenase and related proteases. (331 aa)    
Predicted Functional Partners:
KYC_21426
Putative protease; COG0826 Collagenase and related proteases.
 
 
 0.992
KYC_21431
Sterol-binding domain-containing protein; COG3154 Putative lipid carrier protein.
 
  
 0.955
KYC_21411
HAMP domain-containing protein 9; COG3850 Signal transduction histidine kinase, nitrate/nitrite-specific.
 
    0.722
KYC_21064
Regulatory protein NosR; COG3901 Regulator of nitric oxide reductase transcription.
  
    0.631
KYC_21416
Transcriptional regulator DegU; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
       0.550
KYC_21039
NosL family protein; COG4314 Predicted lipoprotein involved in nitrous oxide reduction.
  
    0.543
KYC_21356
NnrS family protein; COG3213 Uncharacterized protein involved in response to NO.
 
    0.533
KYC_05986
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
    0.522
KYC_21054
Copper-binding periplasmic protein; COG3420 Nitrous oxidase accessory protein.
 
    0.513
nosZ
Nitrous-oxide reductase; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; In the C-terminal section; belongs to the cytochrome c oxidase subunit 2 family.
  
    0.509
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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