STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_22481Tripartite ATP-independent periplasmic transporter DctQ; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (187 aa)    
Predicted Functional Partners:
KYC_22486
TRAP dicarboxylate transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.971
KYC_22476
TRAP dicarboxylate transporter subunit DctP; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.958
KYC_15632
TRAP transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.841
KYC_05876
TRAP transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.802
KYC_17017
TRAP transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.795
KYC_15627
Tripartite ATP-independent periplasmic transporter subunit DctQ family protein 12; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.789
KYC_15622
TRAP transporter solute receptor subunit DctP family protein 8; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.780
KYC_04842
TRAP transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.774
KYC_08515
TRAP transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.774
KYC_07096
TRAP transporter subunit DctM; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
 0.752
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.