STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_24347COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain. (183 aa)    
Predicted Functional Partners:
KYC_24352
His Kinase A phosphoacceptor domain-containing protein 10; COG0642 Signal transduction histidine kinase.
 
  
 0.994
KYC_20574
Sensory box protein 6; COG2203 FOG: GAF domain.
 
 
 0.936
KYC_26432
COG0642 Signal transduction histidine kinase.
 
 
 0.890
KYC_22281
Sensory box protein 2; COG2202 FOG: PAS/PAC domain.
   
 0.831
KYC_18080
COG0642 Signal transduction histidine kinase.
 
 
 0.822
KYC_01430
Response regulator receiver protein; COG0784 FOG: CheY-like receiver.
 
 
 0.794
KYC_01739
C4-dicarboxylate transport sensor protein DctS; COG2202 FOG: PAS/PAC domain.
    
 0.765
KYC_24837
Sensory box protein 10; COG2202 FOG: PAS/PAC domain.
    
 0.750
KYC_26447
Response regulator receiver sensor signal transduction histidine kinase; COG0784 FOG: CheY-like receiver.
 
 
 0.743
KYC_02109
CheA signal transduction histidine kinase 2; COG0643 Chemotaxis protein histidine kinase and related kinases.
     
 0.680
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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