Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KYC_09335 | KYC_17598 | KYC_09335 | KYC_17598 | Hypothetical protein. | GTPase; COG3596 Predicted GTPase. | 0.984 |
KYC_09335 | KYC_24397 | KYC_09335 | KYC_24397 | Hypothetical protein. | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | 0.648 |
KYC_09335 | glpK | KYC_09335 | KYC_19294 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.505 |
KYC_09335 | polA | KYC_09335 | KYC_16282 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.484 |
KYC_17077 | KYC_17598 | KYC_17077 | KYC_17598 | Hypothetical protein. | GTPase; COG3596 Predicted GTPase. | 0.984 |
KYC_17077 | KYC_24397 | KYC_17077 | KYC_24397 | Hypothetical protein. | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | 0.648 |
KYC_17077 | glpK | KYC_17077 | KYC_19294 | Hypothetical protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.505 |
KYC_17077 | polA | KYC_17077 | KYC_16282 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.484 |
KYC_17598 | KYC_09335 | KYC_17598 | KYC_09335 | GTPase; COG3596 Predicted GTPase. | Hypothetical protein. | 0.984 |
KYC_17598 | KYC_17077 | KYC_17598 | KYC_17077 | GTPase; COG3596 Predicted GTPase. | Hypothetical protein. | 0.984 |
KYC_17598 | KYC_24397 | KYC_17598 | KYC_24397 | GTPase; COG3596 Predicted GTPase. | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | 0.416 |
KYC_17598 | glpK | KYC_17598 | KYC_19294 | GTPase; COG3596 Predicted GTPase. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.485 |
KYC_17598 | kdkA | KYC_17598 | KYC_17042 | GTPase; COG3596 Predicted GTPase. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.984 |
KYC_17598 | polA | KYC_17598 | KYC_16282 | GTPase; COG3596 Predicted GTPase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.450 |
KYC_24392 | KYC_24397 | KYC_24392 | KYC_24397 | Tat pathway signal sequence domain-containing protein 22; COG3191 L-aminopeptidase/D-esterase. | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | 0.513 |
KYC_24397 | KYC_09335 | KYC_24397 | KYC_09335 | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | Hypothetical protein. | 0.648 |
KYC_24397 | KYC_17077 | KYC_24397 | KYC_17077 | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | Hypothetical protein. | 0.648 |
KYC_24397 | KYC_17598 | KYC_24397 | KYC_17598 | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | GTPase; COG3596 Predicted GTPase. | 0.416 |
KYC_24397 | KYC_24392 | KYC_24397 | KYC_24392 | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | Tat pathway signal sequence domain-containing protein 22; COG3191 L-aminopeptidase/D-esterase. | 0.513 |
KYC_24397 | glpK | KYC_24397 | KYC_19294 | hemolysin-III related family protein; COG1272 Predicted membrane protein, hemolysin III homolog. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.547 |
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