STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_24577Inner membrane protein 1; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. (317 aa)    
Predicted Functional Partners:
KYC_24582
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.779
KYC_21326
Putative hydrolase; COG0400 Predicted esterase.
  
     0.519
KYC_24312
TonB-dependent receptor YncD; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.478
KYC_01280
Type-1 fimbrial protein; COG3539 P pilus assembly protein, pilin FimA.
  
     0.473
KYC_13407
COG0625 Glutathione S-transferase.
  
  
  0.464
KYC_01904
Hypothetical protein.
  
   
 0.450
KYC_07500
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.450
KYC_16807
Lipoprotein 5.
  
     0.426
KYC_12948
Lipoprotein 14.
  
     0.414
KYC_10568
Phospholipid-binding domain-containing protein 1; COG2823 Predicted periplasmic or secreted lipoprotein.
  
     0.400
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.