STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KYC_27042Hypothetical protein; COG1122 ABC-type cobalt transport system, ATPase component. (134 aa)    
Predicted Functional Partners:
KYC_27037
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
       0.813
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.781
KYC_27032
GDP-mannose mannosyl hydrolase; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
       0.773
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
       0.766
KYC_27027
Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
       0.759
KYC_27057
Polysaccharide biosynthesis family protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
       0.692
KYC_27062
COG0463 Glycosyltransferases involved in cell wall biogenesis.
       0.600
KYC_27067
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
       0.570
KYC_27072
COG0438 Glycosyltransferase.
       0.535
KYC_27082
Putative acyl transferase; COG0110 Acetyltransferase (isoleucine patch superfamily).
       0.526
Your Current Organism:
Achromobacter arsenitoxydans
NCBI taxonomy Id: 477184
Other names: A. arsenitoxydans SY8, Achromobacter arsenitoxydans SY8, Achromobacter arsenitoxydans str. SY8, Achromobacter arsenitoxydans strain SY8, Achromobacter sp. SY8, arsenite-oxidizing bacterium SY8
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