STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP00447.1Antitermination regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (829 aa)    
Predicted Functional Partners:
AJP00446.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.724
AJP05863.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.686
AJP00448.1
Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
   
 0.601
AJP05339.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.551
AJP02626.1
Anti-sigma B factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
 
   0.539
AJP00449.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.534
AJP03949.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.534
AJP04162.1
Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.533
AJP01918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.528
AJP00450.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.524
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.