STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP00660.1SyrP; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
AJP05138.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 0.883
AJP06017.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.746
AJP03909.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.743
AJP05037.1
Protein mbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.735
AJP00659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.714
AJP00630.1
Thioester reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.712
AJP00316.1
Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.692
AJP00658.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.683
AJP00811.1
Antibiotic synthesis protein MbtH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.640
AJP00810.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.615
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.