STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP05483.1Glucosylceramidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 30 family. (612 aa)    
Predicted Functional Partners:
AJP04612.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.909
AJP05266.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.909
AJP04998.1
5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.781
AJP05379.1
Coagulation factor 5/8 type domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.661
AJP05927.1
Glycoside hydrolase family 16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.648
AJP05488.1
Secreted glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
AJP05380.1
Coagulation factor 5/8 type domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.599
AJP04918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.585
AJP00705.1
APHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.559
AJP03969.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.