STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP03757.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (318 aa)    
Predicted Functional Partners:
AJP03756.1
PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.956
AJP03408.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.831
AJP05822.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.760
AJP01774.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.669
AJP05767.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.597
AJP05784.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.585
AJP04017.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.565
AJP03758.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.558
AJP01271.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.556
kgd
Alpha-ketoglutarate decarboxylase; Kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.