STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP04318.1DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology. (2108 aa)    
Predicted Functional Partners:
AJP04317.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.961
AJP04316.1
Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.959
AJP04300.1
DNA helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.860
AJP04301.1
McrBC 5-methylcytosine restriction system component; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.804
AJP04302.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.798
AJP04299.1
N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
AJP01485.1
Phenazine biosynthesis protein PhzA/PhzB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
AJP02299.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.561
AJP04315.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.475
AJP03178.1
Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.