STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP04724.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (451 aa)    
Predicted Functional Partners:
AJP04723.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.992
AJP00904.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.939
AJP04727.1
Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.856
AJP04728.1
Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.836
AJP04725.1
UbiA prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.833
AJP04729.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.809
AJP04722.1
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.799
AJP04730.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.797
AJP04731.1
Tat (twin-arginine translocation) pathway signal sequence; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
AJP04726.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.740
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.