STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP05025.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)    
Predicted Functional Partners:
AJP05026.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.972
AJP05027.1
VWA containing CoxE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.955
AJP05959.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.934
AJP05028.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.850
AJP00675.1
Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
AJP03150.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.562
AJP00931.1
Toxin-antitoxin system, toxin component; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.547
AJP01940.1
Toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.524
AJP00573.1
Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
AJP05024.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.416
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.