STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP05987.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)    
Predicted Functional Partners:
AJP05273.1
Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.969
AJP05274.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.953
AJP05275.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
AJP05276.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
AJP05277.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.643
AJP05278.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
AJP05905.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.446
AJP04382.1
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.445
AJP04144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
AJP05992.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.