STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJP05305.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (930 aa)    
Predicted Functional Partners:
AJP05306.1
PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.893
AJP05992.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.812
AJP00936.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.601
AJP04836.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.482
AJP03456.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
AJP02609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.442
AJP00322.1
Regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.436
AJP00311.1
SARP family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.410
Your Current Organism:
Streptomyces cyaneogriseus
NCBI taxonomy Id: 477245
Other names: S. cyaneogriseus subsp. noncyanogenus, Streptomyces cyaneogriseus subsp. noncyanogenus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.