Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_0084 | T261_0785 | T261_0084 | T261_0785 | Hypothetical protein. | Hypothetical protein. | 0.504 |
T261_0084 | T261_1044 | T261_0084 | T261_1044 | Hypothetical protein. | Hypothetical protein. | 0.436 |
T261_0084 | T261_3274 | T261_0084 | T261_3274 | Hypothetical protein. | Hypothetical protein. | 0.812 |
T261_0084 | T261_4491 | T261_0084 | T261_4491 | Hypothetical protein. | Acetoin utilization protein AcuC. | 0.545 |
T261_0084 | T261_5712 | T261_0084 | T261_5712 | Hypothetical protein. | Hypothetical protein. | 0.482 |
T261_0084 | T261_5864 | T261_0084 | T261_5864 | Hypothetical protein. | Hypothetical protein. | 0.482 |
T261_0084 | T261_6563 | T261_0084 | T261_6563 | Hypothetical protein. | Hypothetical protein. | 0.770 |
T261_0084 | T261_6616 | T261_0084 | T261_6616 | Hypothetical protein. | Hypothetical protein. | 0.528 |
T261_0084 | alaS | T261_0084 | T261_6756 | Hypothetical protein. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.732 |
T261_0084 | rplF | T261_0084 | T261_4679 | Hypothetical protein. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.460 |
T261_0785 | T261_0084 | T261_0785 | T261_0084 | Hypothetical protein. | Hypothetical protein. | 0.504 |
T261_0785 | T261_1044 | T261_0785 | T261_1044 | Hypothetical protein. | Hypothetical protein. | 0.930 |
T261_0785 | T261_3274 | T261_0785 | T261_3274 | Hypothetical protein. | Hypothetical protein. | 0.860 |
T261_0785 | T261_4491 | T261_0785 | T261_4491 | Hypothetical protein. | Acetoin utilization protein AcuC. | 0.946 |
T261_0785 | T261_5712 | T261_0785 | T261_5712 | Hypothetical protein. | Hypothetical protein. | 0.996 |
T261_0785 | T261_5864 | T261_0785 | T261_5864 | Hypothetical protein. | Hypothetical protein. | 0.997 |
T261_0785 | T261_6563 | T261_0785 | T261_6563 | Hypothetical protein. | Hypothetical protein. | 0.828 |
T261_0785 | T261_6616 | T261_0785 | T261_6616 | Hypothetical protein. | Hypothetical protein. | 0.996 |
T261_0785 | alaS | T261_0785 | T261_6756 | Hypothetical protein. | Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.972 |
T261_0785 | rplF | T261_0785 | T261_4679 | Hypothetical protein. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.976 |
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