Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T261_0959Hypothetical protein. (238 aa)    
Predicted Functional Partners:
T261_0960
Hypothetical protein; Belongs to the cytochrome P450 family.
  
  
 0.864
T261_3722
Hypothetical protein; Belongs to the WXG100 family.
  
     0.699
T261_5735
Hypothetical protein.
  
     0.659
T261_3368
Hypothetical protein; Belongs to the WXG100 family.
  
     0.657
T261_8448
Hypothetical protein.
  
     0.656
T261_5736
Hypothetical protein.
  
     0.604
T261_5766
Hypothetical protein.
  
     0.599
T261_3533
Hypothetical protein.
  
     0.596
T261_1769
Hypothetical protein.
  
     0.592
T261_0956
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
       0.560
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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