STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T261_1008Hypothetical protein. (133 aa)    
Predicted Functional Partners:
T261_1009
Hypothetical protein.
 
   
 0.953
T261_1010
Hypothetical protein.
 
     0.952
T261_1007
Hypothetical protein.
 
  
 0.871
T261_2507
Hypothetical protein.
 
 
 0.819
T261_1180
Hypothetical protein.
 
 
 0.818
T261_2511
Hypothetical protein.
 
 
 0.815
T261_2512
Hypothetical protein.
 
  
 0.798
T261_7471
Hypothetical protein.
 
     0.798
T261_2508
Hypothetical protein.
 
  
 0.797
T261_5545
Hypothetical protein.
 
   
 0.795
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.