STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T261_1143Hypothetical protein. (383 aa)    
Predicted Functional Partners:
T261_3408
Putative PTS system EIIBC component YbbF.
  
 
 0.973
T261_1144
Hypothetical protein.
 
     0.877
T261_1142
Hypothetical protein.
 
   
 0.762
T261_1141
Hypothetical protein.
     
 0.682
AQY20446.1
Hypothetical protein.
  
 
 0.558
T261_1140
Oligopeptide transport system permease protein AppC.
       0.544
T261_1139
Hypothetical protein; Belongs to the ABC transporter superfamily.
  
    0.535
T261_5210
Putative PTS system glucosamine-specific EIICBA component.
  
 
 0.497
T261_5211
Putative PTS system glucosamine-specific EIICBA component.
  
 
 0.497
T261_1635
Hypothetical protein.
       0.481
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.