STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T261_1396Hypothetical protein. (400 aa)    
Predicted Functional Partners:
T261_1399
Hypothetical protein.
  
 
 0.848
T261_1400
Hypothetical protein.
  
  
 0.773
T261_1402
Hypothetical protein.
       0.738
T261_1401
Hypothetical protein.
       0.737
T261_1397
Hypothetical protein.
       0.732
T261_1398
Hypothetical protein.
       0.732
T261_7397
Dimethylglycine oxidase; Belongs to the GcvT family.
 
  
 0.637
T261_1403
Hypothetical protein.
       0.596
T261_5936
Phenoxybenzoate dioxygenase subunit beta.
 
  
 0.536
T261_7189
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit.
 
  
 0.424
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.