Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_1023 | T261_1655 | T261_1023 | T261_1655 | Alpha-amylase. | Hypothetical protein. | 0.401 |
T261_1023 | T261_5931 | T261_1023 | T261_5931 | Alpha-amylase. | Hypothetical protein; Belongs to the glycosyl hydrolase 13 family. | 0.847 |
T261_1434 | T261_1655 | T261_1434 | T261_1655 | Hypothetical protein. | Hypothetical protein. | 0.401 |
T261_1654 | T261_1655 | T261_1654 | T261_1655 | Hypothetical protein. | Hypothetical protein. | 0.502 |
T261_1655 | T261_1023 | T261_1655 | T261_1023 | Hypothetical protein. | Alpha-amylase. | 0.401 |
T261_1655 | T261_1434 | T261_1655 | T261_1434 | Hypothetical protein. | Hypothetical protein. | 0.401 |
T261_1655 | T261_1654 | T261_1655 | T261_1654 | Hypothetical protein. | Hypothetical protein. | 0.502 |
T261_1655 | T261_1656 | T261_1655 | T261_1656 | Hypothetical protein. | N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D. | 0.447 |
T261_1655 | T261_1657 | T261_1655 | T261_1657 | Hypothetical protein. | Hypothetical protein. | 0.411 |
T261_1655 | T261_1683 | T261_1655 | T261_1683 | Hypothetical protein. | Hypothetical protein. | 0.401 |
T261_1655 | T261_2073 | T261_1655 | T261_2073 | Hypothetical protein. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.405 |
T261_1655 | T261_4378 | T261_1655 | T261_4378 | Hypothetical protein. | Hypothetical protein. | 0.481 |
T261_1655 | T261_5931 | T261_1655 | T261_5931 | Hypothetical protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 13 family. | 0.417 |
T261_1655 | arcA | T261_1655 | T261_2074 | Hypothetical protein. | Arginine deiminase. | 0.585 |
T261_1656 | T261_1655 | T261_1656 | T261_1655 | N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D. | Hypothetical protein. | 0.447 |
T261_1656 | T261_1657 | T261_1656 | T261_1657 | N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D. | Hypothetical protein. | 0.709 |
T261_1657 | T261_1655 | T261_1657 | T261_1655 | Hypothetical protein. | Hypothetical protein. | 0.411 |
T261_1657 | T261_1656 | T261_1657 | T261_1656 | Hypothetical protein. | N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D. | 0.709 |
T261_1683 | T261_1655 | T261_1683 | T261_1655 | Hypothetical protein. | Hypothetical protein. | 0.401 |
T261_1683 | T261_5931 | T261_1683 | T261_5931 | Hypothetical protein. | Hypothetical protein; Belongs to the glycosyl hydrolase 13 family. | 0.456 |
page 1 of 2