STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T261_1717Crotonyl-CoA reductase. (445 aa)    
Predicted Functional Partners:
T261_1720
Hypothetical protein.
 
   0.942
T261_1718
Protein MeaA.
 
   
 0.939
T261_1721
Hypothetical protein.
 
 
 0.872
T261_4311
Malyl-CoA/beta-methylmalyl-CoA/citramalyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.740
T261_1719
L-malyl-CoA/beta-methylmalyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.738
T261_1714
3-hydroxybutyryl-CoA dehydrogenase.
 
  
 0.734
psd
Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
  
    0.655
T261_1723
Hypothetical protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.580
T261_4310
(3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.565
AQY20297.1
Hypothetical protein.
       0.559
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.