Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_0227 | T261_0243 | T261_0227 | T261_0243 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hypothetical protein. | 0.822 |
T261_0227 | T261_0855 | T261_0227 | T261_0855 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hypothetical protein. | 0.648 |
T261_0227 | T261_1968 | T261_0227 | T261_1968 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.939 |
T261_0227 | T261_1970 | T261_0227 | T261_1970 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.648 |
T261_0227 | T261_1973 | T261_0227 | T261_1973 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hypothetical protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.877 |
T261_0227 | T261_4279 | T261_0227 | T261_4279 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Hypothetical protein. | 0.939 |
T261_0227 | cysC | T261_0227 | T261_1971 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Putative adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.822 |
T261_0227 | cysD | T261_0227 | T261_1972 | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sulfate adenylyltransferase subunit 2. | 0.648 |
T261_0243 | T261_0227 | T261_0243 | T261_0227 | Hypothetical protein. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.822 |
T261_0243 | T261_0855 | T261_0243 | T261_0855 | Hypothetical protein. | Hypothetical protein. | 0.930 |
T261_0243 | T261_1104 | T261_0243 | T261_1104 | Hypothetical protein. | Hypothetical protein. | 0.858 |
T261_0243 | T261_1968 | T261_0243 | T261_1968 | Hypothetical protein. | Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.800 |
T261_0243 | T261_1970 | T261_0243 | T261_1970 | Hypothetical protein. | Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily. | 0.930 |
T261_0243 | T261_1973 | T261_0243 | T261_1973 | Hypothetical protein. | Hypothetical protein; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.875 |
T261_0243 | T261_4279 | T261_0243 | T261_4279 | Hypothetical protein. | Hypothetical protein. | 0.800 |
T261_0243 | cysD | T261_0243 | T261_1972 | Hypothetical protein. | Sulfate adenylyltransferase subunit 2. | 0.930 |
T261_0855 | T261_0227 | T261_0855 | T261_0227 | Hypothetical protein. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.648 |
T261_0855 | T261_0243 | T261_0855 | T261_0243 | Hypothetical protein. | Hypothetical protein. | 0.930 |
T261_0855 | T261_1104 | T261_0855 | T261_1104 | Hypothetical protein. | Hypothetical protein. | 0.625 |
T261_0855 | T261_1968 | T261_0855 | T261_1968 | Hypothetical protein. | Sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.771 |
page 1 of 5