Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AQY20224.1 | T261_1561 | T261_00802 | T261_1561 | Hypothetical protein. | Hypothetical protein. | 0.689 |
AQY20224.1 | T261_2283 | T261_00802 | T261_2283 | Hypothetical protein. | Putative ATP-dependent helicase DinG-like protein. | 0.931 |
AQY20224.1 | T261_3392 | T261_00802 | T261_3392 | Hypothetical protein. | Hypothetical protein. | 0.689 |
AQY20224.1 | T261_4896 | T261_00802 | T261_4896 | Hypothetical protein. | Hypothetical protein. | 0.689 |
AQY20224.1 | T261_5181 | T261_00802 | T261_5181 | Hypothetical protein. | Hypothetical protein. | 0.689 |
AQY20224.1 | polA | T261_00802 | T261_6182 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.900 |
AQY20224.1 | rpoA | T261_00802 | T261_4693 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.633 |
AQY20224.1 | rpoB | T261_00802 | T261_4656 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.660 |
AQY20224.1 | topA | T261_00802 | T261_3765 | Hypothetical protein. | DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.855 |
T261_1561 | AQY20224.1 | T261_1561 | T261_00802 | Hypothetical protein. | Hypothetical protein. | 0.689 |
T261_1561 | T261_2283 | T261_1561 | T261_2283 | Hypothetical protein. | Putative ATP-dependent helicase DinG-like protein. | 0.973 |
T261_1561 | polA | T261_1561 | T261_6182 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.689 |
T261_1561 | rpoA | T261_1561 | T261_4693 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.960 |
T261_1561 | rpoB | T261_1561 | T261_4656 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.960 |
T261_1561 | rpoZ | T261_1561 | T261_6779 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.959 |
T261_2283 | AQY20224.1 | T261_2283 | T261_00802 | Putative ATP-dependent helicase DinG-like protein. | Hypothetical protein. | 0.931 |
T261_2283 | T261_1561 | T261_2283 | T261_1561 | Putative ATP-dependent helicase DinG-like protein. | Hypothetical protein. | 0.973 |
T261_2283 | T261_3392 | T261_2283 | T261_3392 | Putative ATP-dependent helicase DinG-like protein. | Hypothetical protein. | 0.973 |
T261_2283 | T261_4896 | T261_2283 | T261_4896 | Putative ATP-dependent helicase DinG-like protein. | Hypothetical protein. | 0.973 |
T261_2283 | T261_5181 | T261_2283 | T261_5181 | Putative ATP-dependent helicase DinG-like protein. | Hypothetical protein. | 0.973 |
page 1 of 5