STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T261_3208Hypothetical protein. (245 aa)    
Predicted Functional Partners:
T261_1890
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
  
 0.781
T261_3326
Putative citrate synthase 2; Belongs to the citrate synthase family.
  
 
 0.751
mshD
Mycothiol acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.
  
    0.751
T261_5334
Citrate synthase 1; Belongs to the citrate synthase family.
  
 
 0.751
T261_2849
Hypothetical protein.
   
    0.750
T261_3207
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
       0.667
T261_2052
Aconitate hydratase A; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
 
 0.525
T261_3206
Hypothetical protein.
     
 0.514
T261_1839
Malate synthase; Belongs to the malate synthase family.
  
  
 0.477
T261_7216
Acetoacetyl-coenzyme A synthetase.
 
  
 0.449
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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