STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T261_3333Hypothetical protein. (532 aa)    
Predicted Functional Partners:
T261_3334
Hypothetical protein.
 
  
 0.934
T261_3332
Hypothetical protein.
 0.917
T261_5313
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.907
T261_3335
Hypothetical protein.
 
     0.874
AQY20507.1
Hypothetical protein.
 
 0.841
AQY20154.1
Biotin carboxylase.
 
 0.826
AQY20508.1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.823
T261_6483
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
 
 0.821
T261_3331
Acyl-CoA dehydrogenase fadE12.
 
  
 0.788
T261_3330
Hypothetical protein.
 
 
 0.778
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.