Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_4024 | T261_4025 | T261_4024 | T261_4025 | Hypothetical protein. | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | 0.716 |
T261_4025 | T261_4024 | T261_4025 | T261_4024 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Hypothetical protein. | 0.716 |
T261_4025 | T261_4615 | T261_4025 | T261_4615 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | 2-oxoglutarate oxidoreductase subunit KorA. | 0.401 |
T261_4025 | T261_4731 | T261_4025 | T261_4731 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Hypothetical protein. | 0.545 |
T261_4025 | T261_5424 | T261_4025 | T261_5424 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Aminopeptidase N. | 0.583 |
T261_4025 | T261_5432 | T261_4025 | T261_5432 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Aminopeptidase N. | 0.590 |
T261_4025 | T261_6166 | T261_4025 | T261_6166 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Aminopeptidase N. | 0.613 |
T261_4025 | T261_6791 | T261_4025 | T261_6791 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Hypothetical protein. | 0.434 |
T261_4025 | efp | T261_4025 | T261_6766 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.433 |
T261_4025 | guaB | T261_4025 | T261_4730 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.715 |
T261_4025 | orn | T261_4025 | T261_5305 | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. | 0.450 |
T261_4615 | T261_4025 | T261_4615 | T261_4025 | 2-oxoglutarate oxidoreductase subunit KorA. | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | 0.401 |
T261_4615 | T261_6791 | T261_4615 | T261_6791 | 2-oxoglutarate oxidoreductase subunit KorA. | Hypothetical protein. | 0.443 |
T261_4615 | guaB | T261_4615 | T261_4730 | 2-oxoglutarate oxidoreductase subunit KorA. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.462 |
T261_4731 | T261_4025 | T261_4731 | T261_4025 | Hypothetical protein. | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | 0.545 |
T261_4731 | T261_5424 | T261_4731 | T261_5424 | Hypothetical protein. | Aminopeptidase N. | 0.425 |
T261_4731 | T261_5432 | T261_4731 | T261_5432 | Hypothetical protein. | Aminopeptidase N. | 0.416 |
T261_4731 | guaB | T261_4731 | T261_4730 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.981 |
T261_5424 | T261_4025 | T261_5424 | T261_4025 | Aminopeptidase N. | Xaa-Pro aminopeptidase 1; Belongs to the peptidase M24B family. | 0.583 |
T261_5424 | T261_4731 | T261_5424 | T261_4731 | Aminopeptidase N. | Hypothetical protein. | 0.425 |
page 1 of 2