Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_3425 | T261_4249 | T261_3425 | T261_4249 | Putative N-acetylgalactosamine-6-phosphate deacetylase. | Hypothetical protein. | 0.429 |
T261_3425 | nagB | T261_3425 | T261_2812 | Putative N-acetylgalactosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.997 |
T261_4249 | T261_3425 | T261_4249 | T261_3425 | Hypothetical protein. | Putative N-acetylgalactosamine-6-phosphate deacetylase. | 0.429 |
T261_4249 | T261_4250 | T261_4249 | T261_4250 | Hypothetical protein. | Hypothetical protein. | 0.460 |
T261_4249 | T261_4251 | T261_4249 | T261_4251 | Hypothetical protein. | Hypothetical protein. | 0.449 |
T261_4249 | T261_4252 | T261_4249 | T261_4252 | Hypothetical protein. | Hypothetical protein. | 0.454 |
T261_4249 | mshB | T261_4249 | T261_2938 | Hypothetical protein. | 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.480 |
T261_4249 | mshC | T261_4249 | T261_6564 | Hypothetical protein. | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.480 |
T261_4249 | nagB | T261_4249 | T261_2812 | Hypothetical protein. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.577 |
T261_4250 | T261_4249 | T261_4250 | T261_4249 | Hypothetical protein. | Hypothetical protein. | 0.460 |
T261_4250 | T261_4251 | T261_4250 | T261_4251 | Hypothetical protein. | Hypothetical protein. | 0.927 |
T261_4250 | T261_4252 | T261_4250 | T261_4252 | Hypothetical protein. | Hypothetical protein. | 0.955 |
T261_4251 | T261_4249 | T261_4251 | T261_4249 | Hypothetical protein. | Hypothetical protein. | 0.449 |
T261_4251 | T261_4250 | T261_4251 | T261_4250 | Hypothetical protein. | Hypothetical protein. | 0.927 |
T261_4251 | T261_4252 | T261_4251 | T261_4252 | Hypothetical protein. | Hypothetical protein. | 0.952 |
T261_4252 | T261_4249 | T261_4252 | T261_4249 | Hypothetical protein. | Hypothetical protein. | 0.454 |
T261_4252 | T261_4250 | T261_4252 | T261_4250 | Hypothetical protein. | Hypothetical protein. | 0.955 |
T261_4252 | T261_4251 | T261_4252 | T261_4251 | Hypothetical protein. | Hypothetical protein. | 0.952 |
mshB | T261_4249 | T261_2938 | T261_4249 | 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | Hypothetical protein. | 0.480 |
mshB | mshC | T261_2938 | T261_6564 | 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.927 |
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