STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T261_5220Putative peroxiredoxin. (155 aa)    
Predicted Functional Partners:
T261_5221
Hypothetical protein.
       0.734
T261_5222
10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter; Belongs to the GroES chaperonin family.
  
  
 0.653
T261_2909
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
  
 0.637
T261_5223
Quaternary ammonium compound-resistance protein SugE.
     
 0.592
T261_5638
Putative thioredoxin-2.
  
 
 0.571
T261_4136
Thioredoxin-1; Belongs to the thioredoxin family.
  
 
 0.541
T261_3016
Alkyl hydroperoxide reductase subunit C.
 
 
 0.527
T261_5257
Ribonucleotide monophosphatase NagD.
  
    0.499
AQY20412.1
Thioredoxin reductase.
 
  
 0.493
T261_2283
Putative ATP-dependent helicase DinG-like protein.
     
 0.482
Your Current Organism:
Streptomyces lydicus
NCBI taxonomy Id: 47763
Other names: ATCC 25470, BCRC 11919, CBS 703.69, CCRC 11919, CCRC:11919, CECT 3163, DSM 40461, IFO 13058, IMET 43531, ISP 5461, JCM 4492, LMG 19331, LMG:19331, NBRC 13058, NCIMB 12977, NRRL 2433, NRRL-ISP 5461, S. lydicus
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