Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_1858 | T261_5528 | T261_1858 | T261_5528 | Hypothetical protein. | PhoH-like protein. | 0.481 |
T261_1858 | T261_5530 | T261_1858 | T261_5530 | Hypothetical protein. | UPF0053 protein Mbc. | 0.481 |
T261_1858 | T261_5532 | T261_1858 | T261_5532 | Hypothetical protein. | Hypothetical protein. | 0.481 |
T261_1858 | era | T261_1858 | T261_5533 | Hypothetical protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.481 |
T261_1858 | ybeY | T261_1858 | T261_5529 | Hypothetical protein. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.481 |
T261_5521 | T261_5527 | T261_5521 | T261_5527 | Hypothetical protein. | Hypothetical protein. | 0.561 |
T261_5521 | T261_5528 | T261_5521 | T261_5528 | Hypothetical protein. | PhoH-like protein. | 0.481 |
T261_5521 | T261_5530 | T261_5521 | T261_5530 | Hypothetical protein. | UPF0053 protein Mbc. | 0.481 |
T261_5521 | rnz | T261_5521 | T261_5522 | Hypothetical protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.853 |
T261_5521 | ybeY | T261_5521 | T261_5529 | Hypothetical protein. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.628 |
T261_5526 | T261_5527 | T261_5526 | T261_5527 | Hypothetical protein. | Hypothetical protein. | 0.940 |
T261_5526 | T261_5528 | T261_5526 | T261_5528 | Hypothetical protein. | PhoH-like protein. | 0.641 |
T261_5526 | T261_5530 | T261_5526 | T261_5530 | Hypothetical protein. | UPF0053 protein Mbc. | 0.608 |
T261_5526 | ybeY | T261_5526 | T261_5529 | Hypothetical protein. | Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.611 |
T261_5527 | T261_5521 | T261_5527 | T261_5521 | Hypothetical protein. | Hypothetical protein. | 0.561 |
T261_5527 | T261_5526 | T261_5527 | T261_5526 | Hypothetical protein. | Hypothetical protein. | 0.940 |
T261_5527 | T261_5528 | T261_5527 | T261_5528 | Hypothetical protein. | PhoH-like protein. | 0.692 |
T261_5527 | T261_5530 | T261_5527 | T261_5530 | Hypothetical protein. | UPF0053 protein Mbc. | 0.646 |
T261_5527 | T261_5532 | T261_5527 | T261_5532 | Hypothetical protein. | Hypothetical protein. | 0.594 |
T261_5527 | era | T261_5527 | T261_5533 | Hypothetical protein. | GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.446 |
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