Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
T261_5752 | T261_5753 | Hypothetical protein. | Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.853 |
T261_5752 | T261_5754 | Hypothetical protein. | Putative cytochrome c oxidase subunit 1-alpha; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.577 |
T261_5752 | T261_5755 | Hypothetical protein. | Hypothetical protein. | 0.675 |
T261_5753 | T261_5752 | Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.853 |
T261_5753 | T261_5754 | Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. | Putative cytochrome c oxidase subunit 1-alpha; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.616 |
T261_5753 | T261_5755 | Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. | Hypothetical protein. | 0.706 |
T261_5754 | T261_5752 | Putative cytochrome c oxidase subunit 1-alpha; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Hypothetical protein. | 0.577 |
T261_5754 | T261_5753 | Putative cytochrome c oxidase subunit 1-alpha; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.616 |
T261_5754 | T261_5755 | Putative cytochrome c oxidase subunit 1-alpha; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | Hypothetical protein. | 0.841 |
T261_5755 | T261_5752 | Hypothetical protein. | Hypothetical protein. | 0.675 |
T261_5755 | T261_5753 | Hypothetical protein. | Hypothetical protein; Belongs to the sigma-70 factor family. ECF subfamily. | 0.706 |
T261_5755 | T261_5754 | Hypothetical protein. | Putative cytochrome c oxidase subunit 1-alpha; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. | 0.841 |