Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_5336 | T261_6037 | T261_5336 | T261_6037 | Hypothetical protein. | Hypothetical protein. | 0.523 |
T261_5336 | T261_6065 | T261_5336 | T261_6065 | Hypothetical protein. | Hypothetical protein. | 0.499 |
T261_6037 | T261_5336 | T261_6037 | T261_5336 | Hypothetical protein. | Hypothetical protein. | 0.523 |
T261_6037 | T261_6065 | T261_6037 | T261_6065 | Hypothetical protein. | Hypothetical protein. | 0.587 |
T261_6059 | T261_6060 | T261_6059 | T261_6060 | Hypothetical protein. | Hypothetical protein. | 0.941 |
T261_6059 | T261_6061 | T261_6059 | T261_6061 | Hypothetical protein. | Hypothetical protein. | 0.673 |
T261_6059 | T261_6062 | T261_6059 | T261_6062 | Hypothetical protein. | DNA-binding protein. | 0.622 |
T261_6059 | T261_6064 | T261_6059 | T261_6064 | Hypothetical protein. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.558 |
T261_6059 | T261_6065 | T261_6059 | T261_6065 | Hypothetical protein. | Hypothetical protein. | 0.552 |
T261_6059 | thiE | T261_6059 | T261_6063 | Hypothetical protein. | Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.972 |
T261_6059 | thiG | T261_6059 | T261_6058 | Hypothetical protein. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.999 |
T261_6060 | T261_6059 | T261_6060 | T261_6059 | Hypothetical protein. | Hypothetical protein. | 0.941 |
T261_6060 | T261_6061 | T261_6060 | T261_6061 | Hypothetical protein. | Hypothetical protein. | 0.849 |
T261_6060 | T261_6062 | T261_6060 | T261_6062 | Hypothetical protein. | DNA-binding protein. | 0.635 |
T261_6060 | T261_6064 | T261_6060 | T261_6064 | Hypothetical protein. | 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family. | 0.603 |
T261_6060 | T261_6065 | T261_6060 | T261_6065 | Hypothetical protein. | Hypothetical protein. | 0.555 |
T261_6060 | thiE | T261_6060 | T261_6063 | Hypothetical protein. | Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.876 |
T261_6060 | thiG | T261_6060 | T261_6058 | Hypothetical protein. | Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.996 |
T261_6061 | T261_6059 | T261_6061 | T261_6059 | Hypothetical protein. | Hypothetical protein. | 0.673 |
T261_6061 | T261_6060 | T261_6061 | T261_6060 | Hypothetical protein. | Hypothetical protein. | 0.849 |
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