Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T261_0561 | apt | T261_0561 | T261_6744 | Hypothetical protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.740 |
T261_0561 | guaA | T261_0561 | T261_3298 | Hypothetical protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.893 |
T261_4227 | T261_5099 | T261_4227 | T261_5099 | Hypothetical protein. | Hypothetical protein. | 0.845 |
T261_4227 | T261_6407 | T261_4227 | T261_6407 | Hypothetical protein. | Putative prephenate dehydrogenase NovF. | 0.825 |
T261_4227 | apt | T261_4227 | T261_6744 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.827 |
T261_4875 | apt | T261_4875 | T261_6744 | Purine nucleoside phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.876 |
T261_4875 | guaA | T261_4875 | T261_3298 | Purine nucleoside phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.614 |
T261_5099 | T261_4227 | T261_5099 | T261_4227 | Hypothetical protein. | Hypothetical protein. | 0.845 |
T261_5099 | T261_6407 | T261_5099 | T261_6407 | Hypothetical protein. | Putative prephenate dehydrogenase NovF. | 0.900 |
T261_5099 | apt | T261_5099 | T261_6744 | Hypothetical protein. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.881 |
T261_6407 | T261_4227 | T261_6407 | T261_4227 | Putative prephenate dehydrogenase NovF. | Hypothetical protein. | 0.825 |
T261_6407 | T261_5099 | T261_6407 | T261_5099 | Putative prephenate dehydrogenase NovF. | Hypothetical protein. | 0.900 |
T261_6407 | apt | T261_6407 | T261_6744 | Putative prephenate dehydrogenase NovF. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.891 |
apt | T261_0561 | T261_6744 | T261_0561 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.740 |
apt | T261_4227 | T261_6744 | T261_4227 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein. | 0.827 |
apt | T261_4875 | T261_6744 | T261_4875 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Purine nucleoside phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.876 |
apt | T261_5099 | T261_6744 | T261_5099 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Hypothetical protein. | 0.881 |
apt | T261_6407 | T261_6744 | T261_6407 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Putative prephenate dehydrogenase NovF. | 0.891 |
apt | gmk | T261_6744 | T261_6778 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.765 |
apt | guaA | T261_6744 | T261_3298 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.969 |
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