Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
T261_6194 | T261_7943 | Hypothetical protein. | Ferredoxin-1. | 0.435 |
T261_7941 | T261_7942 | Hypothetical protein. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.571 |
T261_7941 | T261_7943 | Hypothetical protein. | Ferredoxin-1. | 0.414 |
T261_7942 | T261_7941 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Hypothetical protein. | 0.571 |
T261_7942 | T261_7943 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Ferredoxin-1. | 0.567 |
T261_7942 | T261_7944 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | Vitamin D3 dihydroxylase; Belongs to the cytochrome P450 family. | 0.796 |
T261_7942 | T261_7945 | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | GDP-perosamine synthase; Belongs to the DegT/DnrJ/EryC1 family. | 0.568 |
T261_7943 | T261_6194 | Ferredoxin-1. | Hypothetical protein. | 0.435 |
T261_7943 | T261_7941 | Ferredoxin-1. | Hypothetical protein. | 0.414 |
T261_7943 | T261_7942 | Ferredoxin-1. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.567 |
T261_7943 | T261_7944 | Ferredoxin-1. | Vitamin D3 dihydroxylase; Belongs to the cytochrome P450 family. | 0.750 |
T261_7943 | T261_7945 | Ferredoxin-1. | GDP-perosamine synthase; Belongs to the DegT/DnrJ/EryC1 family. | 0.544 |
T261_7944 | T261_7942 | Vitamin D3 dihydroxylase; Belongs to the cytochrome P450 family. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.796 |
T261_7944 | T261_7943 | Vitamin D3 dihydroxylase; Belongs to the cytochrome P450 family. | Ferredoxin-1. | 0.750 |
T261_7944 | T261_7945 | Vitamin D3 dihydroxylase; Belongs to the cytochrome P450 family. | GDP-perosamine synthase; Belongs to the DegT/DnrJ/EryC1 family. | 0.698 |
T261_7945 | T261_7942 | GDP-perosamine synthase; Belongs to the DegT/DnrJ/EryC1 family. | Phenolphthiocerol synthesis polyketide synthase type I Pks15/1. | 0.568 |
T261_7945 | T261_7943 | GDP-perosamine synthase; Belongs to the DegT/DnrJ/EryC1 family. | Ferredoxin-1. | 0.544 |
T261_7945 | T261_7944 | GDP-perosamine synthase; Belongs to the DegT/DnrJ/EryC1 family. | Vitamin D3 dihydroxylase; Belongs to the cytochrome P450 family. | 0.698 |