STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pknBTwo component serine/threonine-protein kinase with PASTA sensor; Function of strongly homologous gene; enzyme. (590 aa)    
Predicted Functional Partners:
pstP
Serine/threonine protein phosphatase; Function of strongly homologous gene; enzyme.
 
 
 0.984
CCH85501.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.974
pstP-2
PP2C-family Ser/Thr phosphatase (fragment); Function of strongly homologous gene; enzyme.
 
 
 0.973
CCH85500.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.971
CCH88099.1
Homologs of previously reported genes of unknown function.
 
 
 
 0.963
CCH90052.1
Putative cell division-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative cell process.
   
 
 0.955
CCH89894.1
Homologs of previously reported genes of unknown function.
   
 
 0.869
ribBA
Riboflavin biosynthesis protein ribBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.849
CCH88133.1
Penicillin-binding protein transpeptidase.
  
 0.826
rodA
Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Function of strongly homologous gene; cell process; Belongs to the SEDS family.
 
 
 0.792
Your Current Organism:
Modestobacter marinus
NCBI taxonomy Id: 477641
Other names: CGMCC 4.5581, DSM 45201, M. marinus, Modestobacter marinus Xiao et al. 2011, Modestobacter sp. 42H12-1, strain 42H12-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.